BIOCHEMISTRY QUESTIONS
Protein Chemistry and Metabolism
LAQs [15 marks]
- a) Define proteins. b) Explain the structural organisation of proteins (1°,2°, 3°, 4°). c) Add a note on denaturation of proteins [2+9+4]
- Describe UREA CYCLE**** under following headings : a) Reactions b) Energetics c) Regulation d) Difference b/w CPS1 and CPS2. e) Metabolic disorders
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SAQs and VSAQS
- Write about biologically active peptides.
- Add a note on ISOELECTRIC pH of proteins****.
- Classify amino acids and give examples.
- Write about Transamination and deamination.
- Why are high levels of ammonia toxic? what it does to brain?
- Add a note on BUN(blood urea nitrogen).(3marks)
- Biochemical basis of HARTNUP DISEASE. (3MARKS)
- One Carbon metabolism.
- Synthesis, degradation, functions of POLYAMINES.
- Examples of a) Glucogenic, b) ketogenic c) both Glucogenic and ketogenic amino acids. d) sulphur containing amino acids. e) Aromatic amino acids
- Classify proteins based on their functions.
- Describe structures of (2+2+2+2+2) a) Alpha helix b) Beta pleated sheath c) Collagen****(triple helix) d) Hemoglobin***** [3+3+3+3]
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PLASMA PROTEINS AND IMMUNOGLOBULINS
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SAQS/VSAQS
- Write short note on Plasma proteins and their functions. (5)
- Immunoglobulins: Types & Function. (5)
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NUCLEOTIDE CHEMISTRY
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LAQS
- A) Describe the structure of DNA***. B) Write the salient features of structure of DNA proposed by WATSON & CRICK*** C) CHARGOFFS RULE.
SAQs & VSAQS
- A) Enumerate types of RNA. Write About B) m-RNA C) t-RNA D) r-RNA. (3+3+3+3)
- Add a note on RIBOZYME. (3MARKS)
- Enumerate purines and pyramidines. (3marks)
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NUCLEOTIDE METABOLISM
SAQS & VSAQS
- DENOVO PYRAMIDINE synthesis.(5)
- PURINE SALVAGE PATHWAY***.(5)
- URIC ACID METABOLISM****. (5)
- GOUT(1°,2°,Rx)****.(5)
- LESCH NYHAN SYNDROME*****. (5)
- Orotic Aciduria. (3)
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MOLECULAR BIOLOGY
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LAQS
- Describe the process of DNA REPLICATION with a suitable diagram. Add a note on DNA repair mechanism. [9+6]
- Describe the steps of TRANSCRIPTION with the help of diagram. Add a note on post transcriptional modifications****.[9+6]
- Describe in detail about PROTEIN BIOSYNTHESIS(translation) in body. Add a note on post translational modification. [9+6]
- Explain the steps involved & Tool required in Recombinant DNA is formed. Mention the applications of rDNA in daily life. [10+5]
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SAQs & VSAQS
- DNA polymerases.(3)
- Telomere and telomerase. (3)
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- Inhibitors of replication, translation and transcription. (5)
- Okazaki fragments. (3)
- Add a note on Genetic code. (5)
- Wobbles hypothesis***. (3)
- point mutation and frameshift mutation. (5)
- protein folding & protein targetting. (5)
- LAC OPERON***. (5)
- DNA finger printing. (5)
- zymogens.(3)
- Polymerase Chain Reaction. (5)
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Biochemistry of Cancer
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SAQS & VSAQS
- What are oncogenes? Give two examples.(3)
- What are tumor markers***? Explain with examples.(5)
- Add a note on apoptosis. (3)
HEMOGLOBIN AND PORPHYRIAS
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LAQS(15Marks)
- Decribe the Biosynthesis of Heme and Regulation of Heme Synthesis.
SAQs&VSAQS
- What are Porphyrias? Classify them. write in detail about ACUTE INTERMITTENT PORPHYRIA?******(3+5)
- Write a detail Flowchart showing the process of Degradation of HEME in the human body?****(5M)
- Enumerate Hemoglobin Derivatives.(3M)
- Enumerate Types of normal Hemoglobins.(3M)
- What are Hemoglobinopathies? describe Brefily!(5M)
- Write in detail about Sickle Cell Anemia(molecular basis, mechanism of Sickling, Sickle cell Trait, biochemical test for diagnosis) (5M)
- Write a Short note on Thalessemia. (5M).
- What is jaundice? Mention types of jaundice, Causes of Jaundice, explain findings in Urine and Blood.(10M)
- Write a Short note on Neonatal Physiologic Jaundice!(5M)
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ORGAN FUNCTION TESTS
SAQs & VSAQS
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- Describe the various Biochemical liver Function test. (5)
- Add a Note on Jaundice. Differential diagnosis of JAUNDICE***. (Pre-hepatic, Hepatic, Post-Hepatic) (4+6) [potential Clinical Question]
- Vanden Berghs reaction. (3)
- Fouchets test. (3)
- Write short note on ALT and ALP. (5)
- RENAL FUNCTION TEST- (3+3+3) (a) Inulin clearance (b) Creatinine clearance*** (c) Urea clearance
- Write Short note on Gastric Function test. (3)
- Name the Thyroid Function test with diagnostic importance of each. (5)
- Short Note on Glucose Tolerance test(G.T.T). (3)
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ΧΕΝΟΒΙΟTICS
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LAQ (15marks)
- Describe how Xenobiotics are metabolised in the body. [write in detail about phase1 and phase2 reactions] Give a detailed account of cytochrome P450 in hydroxylation reactions.
Acid-Base Balance
SAQS & VSAQS
- Define a buffer. Describe the types of buffers. (5)
- Add a note on handerson-hesselbach equation.(3)
- Explain the different mechanisms of regulation of blood pH(respiratory and renal) (5+5)
- Add a note on disorders of acid base balance. (5)
- Add a note anion gap.(3)
- Explain: (5+5+5+5) (a) Metabolic Acidosis*** (b) Metabolic Alkalosis*** (c) Respiratory Acidosis*** (d) Respiratory Alkalosis***
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Water and Electrolytes
VSAQS
- Define osmolarity and osmolality.(3)
- Add a note on osmolality of plasma (3)
- Normal Plasma levels of (3) a) Sodium b) potassium c) Calcium d) chloride e) Creatinine f) Urea
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CARBOHYDRATE CHEMISTRY AND METABOLISM
LAQS
- GLYCOLYSIS under the following headings : a) Salient features b) Reactions of glycolysis*** c) Inhibitors of glycolysis.*** d) Fate of pyruvate. (conversion of pyruvate to lactate) e) Energetics of glycolysis.*** f) Regulation of Glycolysis.***
- Describe KREBS CYCLE under the following headings : a) Location b) Reactions & products c) Inhibitors of TCA*** d) Energetics of TCA***** e) Regulation of Krebs cycle
- a. Define GLUCONEOGENESIS
b. Significance of it [1+7+2+3+2]
c. What are its Substrates and pathway involved. [Reactions of gluconeogenesis]
d. Energetics of gluconeogenesis
e. Write a note on regulation of gluconeogenesis. - GLYCOGEN METABOLISM a. Define Glycogenesis and Glycogenolysis. b. Write in detail about the pathway of glycogenesis and c. Explain how are this pathways are regulated.***** [1+2+5+2+5] and glycogenolysis [2+8+5]
- Write in detail about HMP PATHWAY under the following headings. a) Reactions of the pathway oxidative phase Non oxidative phase b) Dynamics of HMP Shunt c) Significance of HMP Shunt** ** [7+3+5]
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SAQs and VSAQS
- Describe RAPAPORT LEUBERING CYCLE*****. + significance of 2,3 - BPG.
- Define Epimer***. Name any two Epimers. (3)
- Write about Mutarotation. (3)
- Derivatives of Monosaccharides (oxidative and Reductive). (3)
- Types of Dissacharides with examples. (Reducing and Non Reducing) (3)
- Describe about Sucrose and Lactose along with their sources. (3)
- PDH complex****. (Name the coenzymes +Reaction+Regulation of PDH) [5marks]
- Fate of acetyl Co-A (3marks).
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- Amphibolic pathway/Role of Citric Acid Cycle***[5marks]
- Anaplerotic reactions of Citric acid cycle***[5marks]
- What is glycogen storage disorder (Defination). write in detail about Von gierke's disease*****. [1+4]
- Write a short notes on a) G6PD deficiency.**** b) Wernicke-korsakoff syndrome.*** [3+2]
- Describe Blood glucose Homeostasis.******* (a) Factors affecting (b) Regulation (c) Glycemic status (d) Role of Hormones (e) Hypoglycemic & Hyperglycemic effect. [10marks]
- Add a short note on Uronic acid pathway. [5marks]
- Describe Lactose intolerance.
- Glycogen storage disorders types**** and write few points regarding each. (6types)
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LIPID METABOLISM
LAQS
- Explain Denovo Synthesis of fatty acids*****. (Fatty acid synthase complex, Reactions&Regulation).
- Describe the process of beta oxidation***** of fatty acids. Add a note on energetics of the pathway.
- a) Biosynthesis of Cholesterol***** b) Regulation of cholesterol synthesis**** c) Degradation of Cholesterol*****
- Metabolism of LIPOPROTEINS*****. (a) CHYLOMICHRONS (b) VLDL (c) HDL******** (d) LDL
- Describe Ketone bodies****** under the following headings : a) Synthesis and Degradation of ketone bodies b) Utilization of ketone bodies c) What happens when there is a excess production of ketone bodies? d) Biochemical basis of KETOSIS in starvation and Diabetes mellitus. [7+3+2+3] [Note:Also study how rotheras test is done to confirm the presence of ketone bodies in urine]
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SAQs and VSAQS
- Role of CARNITINE.*****
- Add a note on Reverse cholesterol transport.
- Add a note on Diabetic Keto acidosis*****
- What are ketone bodies and write about tonuria.(3marks)
- Fatty liver and its causes (3marks)
- Write about Essential fatty acids and their functions. (3marks)
- Explain How LIPIDS are digested and absorbed.
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VITAMINS
LAQS
- Give an account on VITAMIN - A under the following headings. a) Sources b) Chemistry c) Biochem functions : { Role of Vit-A in vision, Wald's Visual cycle*** as antioxidants, other Biochemical functions} d) Daily requirement/RDA e) Deficiency manifestations {-Night Blindness - Xeropthalmia- Bitot-spots and Keratomalacia Extra-ocular Manifestations of Vit-A} f) Vitamin A Toxicity.
- Give an account on Vitamin-D under the following headings. a) sources b) Chemistry c) Biochemical Functions {Action on Intestine, Bone, and Kidneys} d) Daily requirements/RDA e) Deficiency manifestations {-Rickets- Osteomalacia} f) vit-D toxicity.
- Give an account on VITAMIN-C under the following headings. a) Chemistry b) Biochemical Functions c) sources d) Daily requirements and dietary sources e) Deficiency manifestations**** f) Vitamin-C toxicity
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SAQs and VSAQS
- Functions and deficiency manifestations of thiamine (VIT- B1)
- Folic acid(Sources&Functions) and Folate
- Biochemical Functions of Vit-B12
- Biochemical Functions of Vit-K
- Pellagra
- Co-enzymes of Niacin*** and write 2-3 Biochemical reactions of it.
- Wald's Visual cycle ****
- Explain why Thiamine deficiency is one of the causes for Lactic acidosis.
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Mineral metabolism
LAQS
- Describe the Metabolism of CALCIUM under the following headings : a) Sources b) RDA c) Functions (any4) d) Regulation of plasma calcium e) Deficiency manifestations***.
- Explain the IRON metabolism under the following headings : a) Source b) Daily requirements c) Absorption and transport*** d) Functions e) Clinical Manifestations.
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SAQS & VSAQS
- Sources and functions of copper(5)
- Menkes & Wilsons disease(5).
- Biochemical functions of*****(3+3+3) a) IODINE b) ZINC c) SELENIUM
- Biological Role of Fluorine and Add a note on Fluorosis. (5)
- CERULOPLASMIN. (3)
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ENZYMES
LAQS
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- a) Define Enzyme. b) Factors affecting Enzyme activity(draw graphs where ever needed). c) Michael's menten(Km) and its significance.*** d) Lineweaver-burk plot.(only equation and its use).
- a) Write the classification of ENZYMES giving examples. b) Mechanism of action of Enzymes[10+5]
- a) What are ISOENZYMES? b) What are the different ways in which Isoenzymes are identified? c) Discuss clinical Importance of Isoenzymes of CK and LDH [2+7+6]
SAQs
- COENZYMES
- Write about ENZYME INHIBITION****.(competitive inhibition with few examples ~is important)
- Diagnostic importance of enzymes. (Amylase, ALT, AST, ALP, LDH, CK ~write 2-3 points about each)
- Write about metallic enzymes & Pro enzymes.
- Enzymes as therapeutic agents! [VSAQ]
- Absolute Enzyme Specificity.
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BIOLOGICAL OXIDATION
LAQ
- a) Explain the formation of ATP in Electron transport chain. b) components of the Respiratory chain c) Mention the ATP synthesizing sites. d) Inhibitors of ETC. [7+3+2+3]
SAQS
- Write about Oxidative phosphorylation/Chemiosmotic Hypothesis.******
- Add a note on Malate Aspartate shuttle.
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Cell & cellular organelles + Extracellular matrix.
SAQs & VSAQS
- Fluid Mosaic model***.(5)
- Facilitated diffusion. (3)
- Active transport. (5)
- Phagocytosis.(3)
- Structure of Collagen. (5)
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Nutrition
SAQs & VSAQS
- What is BASAL METABOLIC RATE***. How it is determined in clinical laboratory. Add a note on factors affecting BMR. (5)
- Write the calorific values, respiratory quotient and Specific Dynamic Action(SDA) of (5) A) Carbohydrates B) Proteins C) Lipids
- Dietary fiber*** and it's role.(5)
- Glycemic index.(3)
- Kwashiorkor and Marasmus(5)
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